Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFGSFSWRSPMTGTKPTTPVARYFHQEAQRRGYVLDAAQGNAILHLDRLAERLRRGPSLFRQAPRSLYLWGPVGRGKSWLMDGFFRSADLQGLRRTHFHAFFRRLHDGMFRRQGRPDALGGALDELLGDCRLLCFDEFHVHDIGDAMLITRLFRELFGRKI-TLVCTSNYAPRQLLPNPLYHERFLPAIRLIETRMEVLEVAGARDYRTISPRQEIASGYASGGYCWPASCACLDELGLSAPEPSQRVTLQSGARTLQARAVCGDLVWFAFADLCEAPTAVMDYLALGERFSTWVLEGVPPMARCSVAAQQRFINLVDVLYDNDRRFFLSAEKALPDLVEGSDLPADMQRTASRLAQLRQLRC |
| 2KJQ Chain:A ((35-129)) | ---------------------------------------------------------------HGQFIYVWGEEGAGKSHLLQAWVAQALE-AGKNAAY----IDAA----SM-------PLTD--AAFEAEYLAVDQVEKLGNEEQALLFSIFNRFRNSGKGFLLLGSEYTPQQL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KJQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65266 for 652 contacts (-100.1/contact) +
2D Compatibility (PS) -10018 + (NN) -4306 + (LL) 18752
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -64988.0 ( -99.67 by residue)
QMean score : 0.297
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