Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSELNLTTDEARVSYGIGRQLGDQLRENPVPGMTLDAVLAGLSDAFAGIDSRVSGEALSASFQVIRERMQAEAQAKAEAAAGEGRAYLAENAKREGVTVLPSGLQFEVLSTGEGAKPSREDTVRTHYHGTLIDGTVFDSSYQRGQPAEFPVGG--VIAGWVEALQLMNAGSKWRLHVPSELAYGGQAVGS-IPPHSVLVFDVELLEIL |
4GGQ Chain:D ((99-209)) | ------------------------------------------------------------------------------------------------VVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GGQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63866 for 814 contacts (-78.5/contact) +
2D Compatibility (PS) -11397 + (NN) -693 + (LL) 6760
1D Compatibility (HY) -6400 + (ID) 2550
Total energy: -78146.0 ( -96.00 by residue)
QMean score : 0.537
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