Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAVQLIVGLGNPGPEYDQTRHNAGALFVERLAHAQGVSLVADRKYFGLVGKFSHQGKDVRLLIPTTYMNRSGQSVAALAGFFRIAPDAILVAHDELDMPPGVAKLKTGGGHGGHNGLRDIIAQLGNQNSFHRLRLGIGHPGHSSLVSGYVLGRAPRSEQELLDTSIDFALGVLPEMLAGDWTRAMQKLHSQKA
4FNO Chain:B ((1-194))
MTAVQLIVGLGNPGPEYDQTRHNAGALFVERLAHAQGVSLVADRKYFGLVGKFSHQGKDVRLLIPTTYMNRSGQSVAALAGFFRIAPDAILVAHDELDMPPGVAKLKTGGGHGGHNGLRDIIAQLGNQNSFHRLRLGIGHPGHSSLVSGYVLGRAPRSEQELLDTSIDFALGVLPEMLAGDWTRAMQKLHSQKA
General information:
TITO was launched using:
RESULT:
Template:
4FNO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120884 for 1660 contacts (-72.8/contact) +
2D Compatibility (PS) -20974 + (NN) -10961 + (LL) 0
1D Compatibility (HY) -24800 + (ID) 9700
Total energy: -187319.0 ( -112.84 by residue)
QMean score : 0.590
(partial model without unconserved sides chains):
PDB file :
Tito_4FNO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FNO-query.scw
PDB file :
Tito_Scwrl_4FNO.pdb
: