Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------MLEKLFQLKAHNTTVRTEILAGITTFLTMAYILFVNPSILGETGMDKGAVFVATCLAAAIGSTIMGLIANYPIALAPGMGLNAFFTYTVVLHMGHSWQVALGAVFIS-----ATMFFLLSIFRIREWIINSIPLPLRSAIAAGIGLFLALIALQNAGIVVDNPATLIGMGDLTKPAPILATLGFILIVALEARSVTGAVLIGI--LVVTAIAILLGVTQFGGVVSMPPSLAPTFL---QLDIKGALDIGLVSV------IFAFLFVDLFDNSGTLIGVAKRAGLMGKDGHMPKMGRALIADSTAAMGGS-----LLGTSTTTSYIESAAGVSAGGRTGLTAIVVAILFLLALFFAPLAGSVPAFATAPALLFVAVLMASGLAEIDWEDITVAAPVVVTALAMPFTYSIATGIAFGFISWTAIKVLSGRWRELNPALVILSVLFVIKLGFFNA------- |
| 3CM8 Chain:A ((12-471)) | IEPFLKTTPRPLRLPDGPPCSQRSKFLLMDALKLSIEIPLYDAIKCMKT--FFGWKEPNIVKPHEKGINPNYLL--AWKQVLAELQDIENEEKIPKTKNMRKTSQLKWALGENMAPEKVDFEDCKDVSEPKPRSLASWIQSEFNKACELTDSSWIELDEIIASMRRNYFTAEVSHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMIS-KCRTKEGRRKTNLYGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLLRTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAESSVKEKDMTKEFFENKSETWPIGESPKGMEEGSIGKVCRTLLAKSVFNSLYASPQLEGFSA--ESRKLLLIVQALRDNLEPGTFD-------------------------------------LGGLYEAIEECL-INDPWVLLNASWFNSFLTHALK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CM8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -290256 for 2894 contacts (-100.3/contact) +
2D Compatibility (PS) -38945 + (NN) 7915 + (LL) 4688
1D Compatibility (HY) -10800 + (ID) 2750
Total energy: -330148.0 ( -114.08 by residue)
QMean score : 0.055
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