Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTETLVSGTTPVSDNANLKQHLTTPTQEGQTLRDSVEKALHNYFAHLEGQPVTDVYNMVLCEVEAPLLETVMNHVKGNQTKASELLGLNRGTLRKKLKQYDLL
1FIP Chain:B ((27-97))
--------------------------------LRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQALLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGM-
General information:
TITO was launched using:
RESULT:
Template:
1FIP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24187 for 369 contacts (-65.5/contact) +
2D Compatibility (PS) -7684 + (NN) -4493 + (LL) 1668
1D Compatibility (HY) -8800 + (ID) 2150
Total energy: -45646.0 ( -123.70 by residue)
QMean score : 0.682
(partial model without unconserved sides chains):
PDB file :
Tito_1FIP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FIP-query.scw
PDB file :
Tito_Scwrl_1FIP.pdb
: