Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRPLVATVDLSAIRHNYALAKRCAPQRQAFAVVKANAYGHGAREV--VTALHDDADGFAVACLEEAAEVRALHASARILLLEGCFEASEYALAGQLRLDLVIQGAEQGEAFLAAGLDIPLNVWLKLDSGMHRLGFDPAALRAWHARLRSHPGVRELNLISHFACADERNHPLTEQQLESFLGLL------DLDFDQRSLANSAAVLTIPAAHMDWLRPGIMLYGSTPLADLSAAELGLKPAMSLGAQLISLREVAVGESVGYGATWIAERPARIGTVSCGYADGYPRTAPAGTPVLVGGRRAILAGRVSMDMLAVDLSDLPEA-RVGDPVELWGA-GLSVDEVARACGTLGYELLSKVTARVPRRYSH |
| 2DY3 Chain:D ((1-360)) | MNLLTTKIDLDAIAHNTRVLKQMAGPAKLMAVVKANAYNHGVEKVAPVIAAHG-ADAFGVATLAEAMQLRDIGISQEVLCWIWTPE-QDFRAAIDRNIDLAVISPAHAKALIETDAE-HIRVSIKIDSGLHRSGVDEQEWEGVFSALAAAPHIEVTGMFTHLACADEP----TDRQIIAFRRALALARKHGLECPVNHVCNSPAFLTRSDLHMEMVRPGLAFYGLEPVAGL---EHGLKPAMTWEAKVSVVKQIEAGQG-------------FVAVVPAGYADGMPRHAQGKFSVTIDGLDYPQVGRVCMDQFVISLGDNPHGVEAGAKAVIFGENGHDATDFAERLDTINYEVVCRPTGRTVRAY-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DY3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -226004 for 2832 contacts (-79.8/contact) +
2D Compatibility (PS) -36012 + (NN) -16600 + (LL) 1396
1D Compatibility (HY) -20800 + (ID) 5800
Total energy: -303820.0 ( -107.28 by residue)
QMean score : 0.475
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