Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPQPLADNLSPPDPARLAQSIKDWGRELGFQQVGISDVELGEHEAHLQRWLEAGYHGEMDYMAAHGSKRSRPAELVPGTLRVISLRMDYLPGDTRMAQVLATPEKAYVSRYALGRDYHKLIRKRLQQLAERIQAEVGPFGFRAFVDSAPVLEKAIAEQAGLGWIGKNTLVLNRKAGSYFFLGELFVDMPLPVDPAMDSEHCGRCSACLDICPTAAFVGPY---RLDARRCISYLTIEYKGAIPLELRPLIGNRVFGCD------DCQIVCPWNRFARPTGQGDFQPRHSLDNAELAELFLWSEEEFLGRTEGSPLRRAGYERWLRNLAVGLGNAPSTIPVLEALKARRGFPSELVREHVEWALRRHGET |
| 2ZVS Chain:A ((4-59)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITKKCINCDMCEPECPNEAISMGDHIYEINSDKCT------------------------ECVGHYETPTCQKVCPIPNTI--------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZVS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29070 for 272 contacts (-106.9/contact) +
2D Compatibility (PS) -4806 + (NN) -1023 + (LL) 20560
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -16989.0 ( -62.46 by residue)
QMean score : 0.457
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