Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKATRLAIPDVILFEPRVFGDDRGFFFESYNQRAFEEACGHPVSFVQDNHSRSARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEYAEFLYKTTDFWAPEHERCIVWNDPELKIDWPLQDAPLLSEKDRQGKAFADADCFP
2IXH Chain:B ((4-184))
MKATRLAIPDVILFEPRVFGDDRGFFFESYNQRAFEEACGHPVSFVQDNHSRSARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEYAEFLYKTTDFWAPEHERCIVWNDPELKIDWPLQDAPLLSEKDRQGKAFADADCFP
General information:
TITO was launched using:
RESULT:
Template:
2IXH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92596 for 1389 contacts (-66.7/contact) +
2D Compatibility (PS) -18902 + (NN) -3322 + (LL) 0
1D Compatibility (HY) -24800 + (ID) 9050
Total energy: -148670.0 ( -107.03 by residue)
QMean score : 0.399
(partial model without unconserved sides chains):
PDB file :
Tito_2IXH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IXH-query.scw
PDB file :
Tito_Scwrl_2IXH.pdb
: