Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSGWRLLLTRPDEECAALAASLGEAGVHSSSLPLLAIDPLEETPEQRTLMLD-LDRYCAVVVVSKPAARLGLERLDRY---WPQ-PPQQTWCSVGAATAAILEAYGL-DVTYPEQGDDSEALLALPAFQDSLRVHDPKVLIMRGEGGREFLAERLRGQGVQVDYLPLYRRRAPDYPAGELLARVRAERLNGLVVSSGQGLQNLYQLAAADW----PEIGRLPLFVPSPRVAEMARELGAQRVIDCRGASAPALLAALTSAA |
3D8T Chain:A ((33-280)) | --TMRIAYAGLR-RKEEFKALAEKLGFTPLLFPVQATEKVPVP-EYRDQVRELAQGVDLFLATTGVGVRDLLEAGKALGLDLEGPLAKAFRLARGAKAARALKEAGLPPHAVG--DGTSKSLLPLLPQG-----RGVAALQLYGK-PLPLLENALAERGYRVLPLMPYRHLPDPEGILRLEEAVLRGEVDALAFVAAIQVEFLFEGAKDPKALREALNTRVKALAVGRVTADALREWGVKPFYVDETERLGSLLQGFKRA- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3D8T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -115439 for 2019 contacts (-57.2/contact) +
2D Compatibility (PS) -26188 + (NN) -12589 + (LL) 704
1D Compatibility (HY) -5200 + (ID) 2100
Total energy: -160812.0 ( -79.65 by residue)
QMean score : 0.489
|
|
|