Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLELPGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPAHVTSEAIAASYD-AGVLTVRVAGAYKAPAETQAQRIAITK
4MJH Chain:A ((3-87))
--------------------------------------------SEIRHTADRWRVSLDVNHFA-PDELTVKTKDG----VVEITGKHEERQDE-----HG-----YISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAPMP----------------
General information:
TITO was launched using:
RESULT:
Template:
4MJH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38944 for 517 contacts (-75.3/contact) +
2D Compatibility (PS) -9125 + (NN) -5399 + (LL) 4712
1D Compatibility (HY) -4400 + (ID) 1050
Total energy: -54206.0 ( -104.85 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_4MJH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MJH-query.scw
PDB file :
Tito_Scwrl_4MJH.pdb
: