Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLELPGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPAHVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK
4RZK Chain:A ((81-164))
--------------------------------------EEREPLADVIEKGDEIKVVAEVPGVN-KEDIKVKVTNGGK--KLVITAKSE-------------------DRQYYKEIDLPAEVDEKAAKANFKNGVLEITLKKKA---------------
General information:
TITO was launched using:
RESULT:
Template:
4RZK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57388 for 581 contacts (-98.8/contact) +
2D Compatibility (PS) -9041 + (NN) -4258 + (LL) 5000
1D Compatibility (HY) -5600 + (ID) 1150
Total energy: -72437.0 ( -124.68 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_4RZK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RZK-query.scw
PDB file :
Tito_Scwrl_4RZK.pdb
: