Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQIIEGKLQLQGNEKIAILTSRFNHIITDRLKEGAMDCFKRHGGDEELLDLVLVPGAYELPLILDKLLESGKYDGVCVLGAIIRGGTPHFDYVSAEATKGIASAMLKYSMPVSFGVLTTDNIEQAIERAGS--KAGNKGFEAMSTLIELLSLCQTLKD
2C92 Chain:A ((15-157))
----------ASGVRLAIVASSWHGKICDALLDGARKVAAGCGL--DDPTVVRVLGAIEIPVVAQELAR--NHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRA
General information:
TITO was launched using:
RESULT:
Template:
2C92.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108086 for 1220 contacts (-88.6/contact) +
2D Compatibility (PS) -16027 + (NN) -12695 + (LL) 1032
1D Compatibility (HY) -4400 + (ID) 2550
Total energy: -142726.0 ( -116.99 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_2C92.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C92-query.scw
PDB file :
Tito_Scwrl_2C92.pdb
: