Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MVGDTLKLLSPLMTRYFFLLFYSTDSSDLNENQHPL---DFDEMAFGKVKSGISFLIQTGVGILGNSFLLCFYNLILFTGHKLRPTDLILSQLALANSMVLFFKGIP---QTMAAFGLKYLLNDTGCKFVFYYHRVGTRVSLSTICLLNGF---QAIKLNPSICRWMEIKIRSPRFIDFCCLLCWAPH----VLMNASVLLLVNGPLNSKNSSAKNNYGYCSYKASKRFSSLHA----------VLYFSPD------FMSLGFMVWASGSMVFFLYRHKQQVQHNHSNRLSCRP-----SQEARATHT-------IMVLVSSFFVFYSVHSFLTIWTTVVANPGQWIVTNSVLVASCFPARSPFVLIMSDTHISQFCFACRTRKTLFPNLVVMP---------------------------------------------------------- |
| 2ECE Chain:A ((8-462)) | RDPTFYPSPKMAMKAPPEDLAYVACLYTGTGINRADFIAVVDVNPKSETYSKIVHKVE-LPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTNSLYSTWDNQFYPEGLKGWMVKLNANPSGGLEIDKEFFVDFGEARSHQVRLSGGDASSDSYCYP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ECE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -305348 for 2685 contacts (-113.7/contact) +
2D Compatibility (PS) -36864 + (NN) -705 + (LL) 132
1D Compatibility (HY) -4400 + (ID) 1800
Total energy: -348985.0 ( -129.98 by residue)
QMean score : 0.193
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