Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASRYVAVGMI-LSQTVVGVLGSFSVLLHYLSFYCTGCRL-RSTDLIVKHLIVANFLALRCKGVPQTMAAFGVRYFLNALGCKLVFYLHRVGRGVSIGTTCLLSV--FQVITVSSRKSRWAKLKEKAPKHVGFSVLLCWIVCMLVNIIFPMYVTGKWNYTNITVNEDLGYCSGGGNNKIAQTLRAMLLSFPDVLCLGLMLWVSSSMVCILHRHKQRVQHIDR----------------------------------------------------------------------------------------------------------------------------------------------------SDLSPRASPENRATQSILILVSTFVSSYTLSCLFQVCMALLDN---PNSLLVNTSALMSVCFPTLSPFVLMSCDPSVYRFCFAWKR |
| 3V2Y Chain:A ((63-492)) | ----IKLTSVVFILICCFIILENIFVLLT----IWKTKKFHRPMYYFIGNLALSDLLAGVAY-TANLLLSGATTYKLTPAQWFLREGSMFVALSASVFSLLAIAIERYITML-K------------NNFRLFLLISACWVISLILGGLPIM-GWNC--------ISALSSCSTVLPLYH--KHYILFCTTVFTLLLLSIVILYCRIYSLVRTRNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYASRSSENVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTCDILFRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIRIMG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176294 for 1952 contacts (-90.3/contact) +
2D Compatibility (PS) -27149 + (NN) -6339 + (LL) 2740
1D Compatibility (HY) -18000 + (ID) 1450
Total energy: -226492.0 ( -116.03 by residue)
QMean score : ?
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