Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSYKFLKEVLHRLKNIENTLKVLDQSQLNVEDKVEQMGLLEEIRHEIISHNIIKESLAEAGTPSNKKKGDSWQLKLIERMHKSNSAIPIDLVKSLSKVKIECQNLRRLSQSEPSSLEKLKERFADLVKLIRGVVSIKSQQLKCSKYDSLLADYDS------DITEKDVKEIFPKLGKFFSDNIDRIIEKQKKDK----I-------T-----------NTQ-------------------------KIATQKQIELGSLCLQQIGVTS---------------------HHT--------FYHHPIDYDESDFCYGLFLLLRYSGHEIYQRCLAQNSISSSF-----TRYIMCETQGLFMERMIGTSREFIEFIQPYIKEKLTIKGKVNAKINSVENLYLIFNKVNLSSPLKKADEFSLLANIMLRTKLEQDIINGTLEVKDLHDAWLEGMEHYKIPVKAKNEL----DTYFQDEYWVSGTMGYFPIKIIALIIAVQIFSFIKKNHYE---FLGAIIKGDFGLLIGWLSQNVCS--AKCGFLDLLKKVTGKG-LDVECCSSYLSEKYDLSQ |
| 1R42 Chain:A ((157-590)) | --------------------------------------------------------------------------------------------------DYNERLWAWESWRSEV--GKQLRPLYEEYVVLKNEMARANHYE---DYGDYWRGDYEVNGVDGYDYSRGQLIEDVEHTFEEIKPLYEHLHAYVRAKLMNAYPSYISPIGCLPAHLLGDMWGRFWTNLYSLTVPFGQKPNIDVTDAMVDQAWDAQRIFKEAEKFFVSVGLPNMTQGFWENSMLTDPGNVQKAVCHPTAWDLGKGDFRILMCTK--VTMDDFLTAHHEMGHIQYDMAYAA----QPFLLRNGANEGFHEAVGEIMSLSA-ATPKHLKSI-GLLSPDFQ---E------DNET------EIN-FLLKQALTIVGTLPFTYMLEKWRWMVFKGEIPKDQWMKKWWEMKREIVG-VVEPVPHDETYCDPASLFHVSN-DYSFIR-YYTRTLYQFQFQEALCQAAKHEGPLHKCDISN-STEAGQKLF-NMLRLGKSEPWTLALENVVGAKNMNVRPLLNYFEPLFTWLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R42.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176726 for 2585 contacts (-68.4/contact) +
2D Compatibility (PS) -34944 + (NN) -6619 + (LL) 9340
1D Compatibility (HY) -3600 + (ID) 2000
Total energy: -214549.0 ( -83.00 by residue)
QMean score : 0.444
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