Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKDEKSKTLFEVEGAVTALLPAAEFRVKLDNEHEIICHVSGKVRRSKIRIIIGDRVLVEMSIYDRNAKKGRIIRRLKGTSDRTISK
1AH9 Chain:A ((1-71))
-----AKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDL--SKGRIVFRSR---------
General information:
TITO was launched using:
RESULT:
Template:
1AH9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30700 for 467 contacts (-65.7/contact) +
2D Compatibility (PS) -7011 + (NN) 3209 + (LL) 724
1D Compatibility (HY) -4400 + (ID) 1550
Total energy: -39728.0 ( -85.07 by residue)
QMean score : 0.222
(partial model without unconserved sides chains):
PDB file :
Tito_1AH9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AH9-query.scw
PDB file :
Tito_Scwrl_1AH9.pdb
: