Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKRVVIFGGTGFIGKHIVRRLATAGYLIRVFVR-NQEKAACLKLCGNLGQISIFKGDFFDEKLILESVEECNVVINLVGILYEVKEHSFYAVHVGIAEKIARAAKIKNVSMMIHFSAMGIENSKLSEYAQSKLKGEKAVTAAFPEAIIIKPSLVFGKEDNFFTKFARLATILPFLPLIGSGTTKFQPICVTDLAEMVYRIINLNKQDKKIYNIGGPKIYSFKSLLKFILNVTNRKCLLVNVSFPMAKLIAFFLESRIISILLKPITGDISPMLTRDQVRVMMSSSIEKSTDFEAIKIRPLSIENVVPEYLKVYKKY |
2QW8 Chain:B ((6-81)) | MKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAI-IVKGELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVPEEEIVALTKELPEPENIPIAILHCLFIDGATMSYDFKENDVEASTLYPELKFTTIDELLDIFVHDPPPPASAAF------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QW8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67891 for 522 contacts (-130.1/contact) +
2D Compatibility (PS) -8285 + (NN) -4301 + (LL) 744
1D Compatibility (HY) -6800 + (ID) 1400
Total energy: -87933.0 ( -168.45 by residue)
QMean score : 0.703
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