Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCFWYHSSKKAARKEEKIDYLDNKLKMFRNIEFIVSAISLAPLIACVFCPVLSEFGLVTLGVNFLVCFVGSLAFHMKHEKKSDNIEKAKEAVNSYNTPPSYFQNPDVGNSFPSASPYGSQYFPFY
2WW9 Chain:C ((58-78))
-------------------RVDSLVVLFLSVGFIFSVIAL-------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2WW9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -620 for 77 contacts (-8.1/contact) +
2D Compatibility (PS) -2129 + (NN) -630 + (LL) 5804
1D Compatibility (HY) -3600 + (ID) 350
Total energy: -1525.0 ( -19.81 by residue)
QMean score : 0.124
(partial model without unconserved sides chains):
PDB file :
Tito_2WW9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WW9-query.scw
PDB file :
Tito_Scwrl_2WW9.pdb
: