Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHQTIRVNHAGEYGAICIYYGQKFILK---KSSIINKIIEMEGQEKKHFHYFNGKIKEQKVRPTVLLPVWYVLGVSLGVITAI-MGKKAAMACTAAVEEVIGEHYREQVSYL---EDGELKEIISKFCNEELEHRDIAIEHNAESALGYNILSSFVKTGCKVAIYLSKLI
2CF7 Chain:A ((20-159))
--AVLNQAVADLSVAHSILHQVHWYMRGRGFMIWHPKMDEYMEEIDGYLAEMSERLITLGGAPFSTLKEFSENSQLKEVLGDYNVTIEEQLARVVEVFRYLAALFQKGFDVSDEEGDSVTNDIFNVAKASIEKHIWMLQAELGQAPKL----------------------
General information:
TITO was launched using:
RESULT:
Template:
2CF7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33835 for 982 contacts (-34.5/contact) +
2D Compatibility (PS) -13712 + (NN) -1356 + (LL) 1884
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -49269.0 ( -50.17 by residue)
QMean score : 0.188
(partial model without unconserved sides chains):
PDB file :
Tito_2CF7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CF7-query.scw
PDB file :
Tito_Scwrl_2CF7.pdb
: