Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKKYLKAAIYLSLLIYIYISVFSYSYKDISLNTVTDKEVTNLGGIVGSYLADILVQFLGLTSITVATTIICFLIFRPSKRLLKVLYSVLINLGICAMLPQLSLGITARYMHSGIIGNILINNCPFYIFIIATSTGIVGLIGWKRTIYLLFLLYKKVASLLAKVLFFRLYKAAEYPTPPLVVEEKHRAQITTRQQPKERQKKVIGEIFESSSEFKFPSIHLLSKAEESLQRKRLNEMESNKNLS-LLEQVLSDFGVQGKVISVCYGPVVTLYKLEPQAGTKSARVIGLADDIARSMSALSARI-SIIRGQNAMGIELPNKEREIVMLRDLLESLEYQNANLNLPIALGKEISGKPVIADLAKMPHLLVAGTTGSGKSVAINTMILSLIYRLSPDACKMIMIDPKMLELSIYDAIPHLITPVVTEPKKAVIALKWIVKEMENRYRMMSYLNVRNVINYNQKITEAINSGIELERVVQVGFNSTTGKPLFEK-----MPIKMETFSYIVVIVDEMADLMLVAGKEIECSIQRLAQMARAAGIHIIMATQRPSVDVITGVIKANFPTRISFAVTSKIDSRTILGEQGAEQLLGMGDMLYMASG-GKIIRVHGPFVSDEEVQNIVDHLKMQGEPNYMEEITKEDENSSAELKGETEGEENDLYKQAVAIIQRDQKVSTSYIQRQLRIGYNRAANIVERTEKEGIISAPNYLGKREILVE |
2IUU Chain:F ((70-475)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LPPLSLLDPAE---VKQKSYSPESLEAMSRLLEIKLKEFGVEVSVDSVHPGPVITRFEIQPAAGVKVSRISNLAKDLARSLAVISVRVVEVIPGKTTVGIEIPNEDRQMVRFSEVLSSPEYDEHKSTVPLALGHDIGGRPIITDLAKMPHLLVAGTTGSGKSVGVNAMLLSILFKSTPSEARLIMIDPKMLELSIYEGIPHLLCPVVTDMKEAANALRWSVAEMERRYRLMAAMGVRNLAGFNRKVKDAEEAGTPLT------------DPLFRRESPDDEPPQLSTLPTIVVVVDEFADMMMIVGKKVEELIARIAQKARAAGIHLILATQRPSVDVITGLIKANIPTRIAFQVSSKIDSRTILDQGGAEQLLGHGDMLYLPPGTGLPIRVHGAFVSDDEVHRVVEAWKLRGAPDYIEDILA----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IUU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -304314 for 3377 contacts (-90.1/contact) +
2D Compatibility (PS) -42529 + (NN) -11145 + (LL) 25444
1D Compatibility (HY) -41200 + (ID) 10750
Total energy: -384494.0 ( -113.86 by residue)
QMean score : 0.561
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