Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLSIIVIIGIFIITGCDWQRTSKEPSKNAQNQQVIKIGYLP-ITHSANLMMT------KKLLSQYN-HPKYKLELVKFNN---WPDLMDALNSGRIDGASTLIELAMKSKQKGSNIKAVALGH-HEGNVIMGQK--GMH-LNEFNNGDDYHFGIPHRYSTHYLLLEELRKQLKIKPGHFSYHEMSPAEMPAALSEHRITGYSVA-EPFGALGEKLGKGKTLKHGDDVIP-DAYCCVLVLRGELLDQHKDVAQAFVQDYKKSGFKMND-RKQSVDIMTHHF--KQSRDVLTQSAAW--TSYG----D--LTIKPSGYQEITTLVKQHHLF-NPPAYDDFVEPSLYKEASRS |
| 3UIF Chain:A ((4-315)) | --------------------------------DLKVVRIASVATNVGGKTVYAGSASLVVNGAFPEELRKQGIKVEWVPAAMASVGPVINEGFASGKIDFGIYGDLPPIILNASKPTVQLVAPWGTTSNSYLVVPKNSTAKSIKDL---KGKKIALH-RGRPWELAFSNLLQSEGLTFKDFKIVNVNPQVGAAALASGTVDGFFSLFDSYI--LEDRGVGKIIWSTKTAPVDWKLMGGVWARNDFVKQNPEITQAIVTAYLKSVHWVAQDENKETY-IREYSNKIYPESVNRREYDQDNVSWRQRWSPLYDVALQEHYRKAVAYAQASGLTRTQADVQQMLNPHFVATALK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63978 for 2238 contacts (-28.6/contact) +
2D Compatibility (PS) -30218 + (NN) -9753 + (LL) 2816
1D Compatibility (HY) -8800 + (ID) 2000
Total energy: -111933.0 ( -50.01 by residue)
QMean score : 0.426
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