Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHQETTSQQYNFSIIKHGDISTPQGFTAGGMHIGLRAN-KKDFGWIYSSSLASSAAVYTLNQFKAAPLIVTEDTLQKSKGKLQALVVNSANANSCTGQQGIDDARQTQTWVAQQLQIPSEHVAVASTGVIGEYLPMDKIKTGTEHIKDTNFATPGAFNEA---ILTTDTCTKHIAVSLKIDGKTVTIGGSAKGSGMIHPNMATMLAFITTDASIESNTLHQLLKSSTDHTFNMITVDGDTSTNDMVLVMANHQVEHQILSQDHPQWETFVDAFNFVCTFLAKAIARDGEGATKLISVNVSGAKSISDARKIGKTIVSSNLVKSAIFGEDANFGRIITAIGYSG--CEIDPKCTYVQLNQIPVV--DKGMAVLFDEQAMSNTLTHEHVTIDVQLGLGNAAATAYGCDLSYDYVRINASYRT |
| 1VZ7 Chain:C ((8-390)) | ----------------------TPRGFVVHTAPVGLADDGRDDFTVLASTA--TVSAVFTRSRFAGPSVVLCREAV--ADGQARGVVVLARNANVATGLEGEENAREVREAVARA---PEGEMLIASTGVIGRQYPMESIR---EHLKTLEW------DRAARAIMTTDTRPKEVRV-------TLV--GIAKGVGMLEPDMATLLTFFATDARLDPAEQDRLFRRVMDRTFNAVSIDTDTSTSDTAVLFANG------LAGEVDAGE-FEEALHTAALALVKDIASDGEGAAKLIEVQVTGARDDAQAKRVGKTVVNSPLVKTAVHGCDPNWGRVAMAIGKCSDDTDIDQERVTIRFGEVEVYPP---DDAL--RAAVAEHLRGDEVVIGIDLAIADGAFTVYGCDLTEGYVRLNSE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VZ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168935 for 3068 contacts (-55.1/contact) +
2D Compatibility (PS) -37718 + (NN) -10446 + (LL) 3728
1D Compatibility (HY) -22400 + (ID) 6750
Total energy: -242521.0 ( -79.05 by residue)
QMean score : 0.376
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