Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINQVYQLVA-PRQFDVTYNNVD-IYGNHVIVRPLYLSICAADQRYYTGRRDENVLRKKLPMSLVHEAVGEVVFDSKG-VFEKGTKVVMVPNTPTEQH---HIIAENYLASSYFRSSGYDGFMQDYVVMAHDRIVPLPNDIDLSTIS-YTELVSVSYHAIQRFERKSI-PLKNSFGI-WGDGNLGYITAILLRKLYPE-AKIYVFGKTDYKLSHFS--FVDDIFTVNQ-------IPDDLKIDHAFECVGGKGSQVALQQIVEHISPEGSIALLGVSELPVEVNTRLVLEKGLTLIGSSRSGSKDFEQVVDLYRKYPDIVEKLALLKGHEINVCTMQDIVQAFEMDLSTSWGKTVLKWTI |
| 2H6E Chain:A ((2-344)) | VKSKAALLKKFSE-----DVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAK--QGFRLPIILGHENAGTIVEVGELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQALPF-ISKFAEPVVIVNGIGGLAVYTIQILKA-LMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVGT---EETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSE-SGK----IKPYII-KV---PL---------------GRQVITP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H6E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176133 for 2661 contacts (-66.2/contact) +
2D Compatibility (PS) -32176 + (NN) -3548 + (LL) 3040
1D Compatibility (HY) -10800 + (ID) 2900
Total energy: -222517.0 ( -83.62 by residue)
QMean score : 0.398
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