Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIMFIGDIVGKIGRDAIETYIPQLKQKYKPTVTIVNAENAAHGKGLTEKIYKQLLRNGVDFMTMGNHTYGQREIYDFIDEAKRLVRPANFPDEAPGIGMRFIQINDIKLAVINLQGRAFMPDIDDPFKKADQLVKEAQEQTPFIFVDFHAETTSEKYAMGWHLDGRASAVVGTHTHIQTADERILPKGTGYITDVGMTGFYDGILGINKTEVIERFITSLPQRHVVPNEGRSVLSGVVIDLDKEGKTK-HIERILINDDHPFSTF
4B2O Chain:C ((1-262))
MRILFIGDVVGSPGRDMVKEYVPKLKTKYKPHFTIINGENAAHGKGLTEKIYHSLIQSGADAITMGNHTWDKKEIFDFIDDVPNLVRPANFPEGTPGKGITYVKANGKELAVINLQGRTFLPPLDDPFLKADELIAEAAKRTPYIFIDFHAEATSEKLALGWYTDGRASAVVGTHTHVQTADNRILPKGTAYITDVGMTGPYDGILGMDRETIIKRFKTNLPVRFTVA-EGKTTLSGVVIDIDDQTKKAVKIERILINDDHMF---
General information:
TITO was launched using:
RESULT:
Template:
4B2O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -160402 for 2339 contacts (-68.6/contact) +
2D Compatibility (PS) -28670 + (NN) -16065 + (LL) 76
1D Compatibility (HY) -27200 + (ID) 8450
Total energy: -240711.0 ( -102.91 by residue)
QMean score : 0.643
(partial model without unconserved sides chains):
PDB file :
Tito_4B2O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4B2O-query.scw
PDB file :
Tito_Scwrl_4B2O.pdb
: