Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEWTREERYQRIEDVDTEYFKTLKQQVDQSKFRQQFHIQPETGLLNDPNGLIFYKGKYYVSHQWFPLGAVHGLKYWYNYTSDDLINFKPEGPILNPDTKYDSHGVYSGSAFEYNGHLYYMYTGNHRDNHWQRHASQMIARLKEDGS--VEKFPKPVISQQPEGYTSHFRDPKVFKYGEKYYAIIGAQNNDQQGRLLLYNTEDIINWHYLGEINTELDDFGYMWECPDYFNLDNQDVILICPQGIEPKGNQFKNIYQSGYILGKFDIEKLTYEHENFVELDNGFDFYAPQTFLDEKGRRVLIGWMG--LPEIEYPTDNEGWAHCLTIPRVLNVENGQLKQRPYPALEKLRHNKETALGYANKFTRKLHPYEGKQYELIIDILDNDATEVYFELRTSKTSSTLIAYNKRENKITLDRSDSGLLPTNVEGTTRSTILDTPLKQLQIFVDTSSIEIFCNDGERVLTSRIFPTEDALGIKTSTESGQVYLQFTKYDLKDEHK |
1UYP Chain:E ((2-423)) | --------------------------------FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDD--ETHGVFSGSAVEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYDGNPVISKPPEEGTHAFRDPKVNRSNGEWRMVLGSGKDEKIGRVLLYTSDDLFHWKYEGAIFE--DETTKEIECPDLVRIGEKDILIY----------SITSTNSVLFSMGELKEGKLNVEKRGL--LDHGTDFYAAQTFFGTD-RVVVIGWLQSWLRTGLYPTKREGWNGVMSLPRELYVENNELKVKPVDELLALRKRKVFETAKSGTF---LLDVKENSYEIVCEF----SGEI--ELRMGNESEEVVITKSR-DELIVDTTRSGVSGGEVR---KSTVEDEATNRIRAFLDSCSVEFFFNDS-IAFSFRIHP-ENVYNI-LSVKSNQVKLE----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1UYP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -126785 for 3584 contacts (-35.4/contact) +
2D Compatibility (PS) -44453 + (NN) -13478 + (LL) 4572
1D Compatibility (HY) -30400 + (ID) 7300
Total energy: -217844.0 ( -60.78 by residue)
QMean score : 0.405
|
|
|