Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKDLTMLLDELKDMSFFNKGDICLIGCSTSEV-IGEKIGTVGSMEVAETIFNALDVVSKETGVTFAFQGCEHINRAITIEKSQYNPLTMEEVSVVPDVHAGGSLATYAFQHMKDPIVVEHITVPCGIDIGQTLIGMHIKHVCVPVRTSVKQVGQAIVTIATSRPKKIGGERAKYK
3J7Y Chain:P ((97-141))
-------------------NGKVVVSASTREWAIKKH-----NVVACESIGRVLAQRCLEAGIN---------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3J7Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13114 for 183 contacts (-71.7/contact) +
2D Compatibility (PS) -4202 + (NN) -1633 + (LL) 9816
1D Compatibility (HY) -1200 + (ID) 450
Total energy: -10783.0 ( -58.92 by residue)
QMean score : 0.357
(partial model without unconserved sides chains):
PDB file :
Tito_3J7Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J7Y-query.scw
PDB file :
Tito_Scwrl_3J7Y.pdb
: