Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------MVLFLSIFKKSFNDFLSARMLLINLGPILLSLAFFGAIFYYNGGSIVNYCQTLLPQSLNDYAHSQGFFAGVF------AWVFKALVYFLIFWIVILLSLVINIFASIFYTPLVV------------SYLHQKYYPHVVL--------EEFGSILF--------SIKYFLKSLTFML---------LFLAVLTPLYFIPFIGVFGVFFSIVPHFLFFKNTMSLDIASMIFNHQSYQNLLKQHRLKHYRFSFFCYLF-----------SLIPFFNFFATLLQTLMLTHYFFIFKEKEC-------- |
| 1OMO Chain:A ((1-320)) | METLILTQEEVESLISMDEAMNAVEEAFRLYALGKAQMPPKVYLEFEKGDLRAMPAHLMGYAGLKWVNSHPGNPDKGLPTVMALMILNSPETGFPLAVMDATYTTSLRTGAAGGIAAKYLARKNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQPAEEASRCDVLVTTTPSRKPVVKAEWVEEGTHINAIGADGPGKQELDVEILKKAKIVVDDLEQAKHGGEINVAVSKGVIGVEDVHATIGEVIAGLKDGRESDEEITIFDSTGLAIQDVAVAKVVYENALSKNVGSKIKFF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OMO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -346767 for 2008 contacts (-172.7/contact) +
2D Compatibility (PS) -25378 + (NN) -7035 + (LL) 0
1D Compatibility (HY) 10400 + (ID) 950
Total energy: -369730.0 ( -184.13 by residue)
QMean score : 0.173
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