Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKNYSYKNIQAIDFTQLNDEEKLLVLEFRNHPNTALWMYSANISLKTHLQFIEDLKNSPSHRYFLFKEESVYLGVGSITKINFFHKHGYLGIYKNPFLKNKGGTILKALERIAFEEFQLNSLHLEVMENNFKAIAFYEKNHYELEGRLKGFISKDKEFIDVLLYYKDKKGYNDQSPLKL
4RI1 Chain:B ((8-186))
-KKNYSYKNIQAIDFTNLNDGEKLLVLEFRNHPNTALWMYSTFISLKTHLQFIEDLKNSPNHRYFLFKEEGVYLGVGSITKINFFHKHGYLGIYKNPFLKNGGETILKALEFIAFEEFQLHSLHLEVMENNFKAIAFYEKNHYELEGRLKGFISKDKEFIDVLLYYKDKKGYNDQSLLKL
General information:
TITO was launched using:
RESULT:
Template:
4RI1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64348 for 1312 contacts (-49.0/contact) +
2D Compatibility (PS) -18929 + (NN) -1490 + (LL) 208
1D Compatibility (HY) -27600 + (ID) 8400
Total energy: -120559.0 ( -91.89 by residue)
QMean score : 0.374
(partial model without unconserved sides chains):
PDB file :
Tito_4RI1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RI1-query.scw
PDB file :
Tito_Scwrl_4RI1.pdb
: