Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -MLGKKNEEVLIDENLVGGVIALDRLAKLNKANRTFKRAFYLSMVLNVAAVTSIVMMMPLKKTDIFVYGIDRYT----GEFKIVKRSDARQIVNSEAVVDSATSKFVSLLFGYSKNSLRDRKDQLMQYCDVSFQTQAMRMFNENIRQFVDKVRAEAIISSNIQREKVKNSPLTRLTFFITIKITPDTMENYEYITKKQVTIYYDFARGNSSQENLIIN--PFGFKVFDIQITDLQNEQTVSEILRKIKEVESKNKALNK------- |
4MB0 Chain:A ((9-261)) | PRYWSLYYREKIIEGMEKGMTAKAGLIAHGRGEAFDYLIGERTIEPAERAMRAAVAKLLLAENPVVSVNGNVAALVPKETIELARALNAKLEINLFYRTEDRVKAIAEELRKY------DPEIELL---GINPTKRIPGLEHERGKVDENGIWKADVVVVPLEDGDRTEALVRMGKFVITIDLNPLS----RSARMADITIVDNIVRAYPRMTELAREMKDYSRGELIRIIEEYDNGKTLNDVLLHIRDRLTKLAEGGIWRKKQLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40770 for 2008 contacts (-20.3/contact) +
2D Compatibility (PS) -24549 + (NN) -2675 + (LL) 796
1D Compatibility (HY) -400 + (ID) 1500
Total energy: -69098.0 ( -34.41 by residue)
QMean score : 0.275
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