Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEQNKKSLENLDLSDVQNISKDISGTALEELSLKNLDKNLQILKEVGAAEICKATKIASKNIHSILEKRYESLSRVHARGFIQILEHEYKIDLSAWVKEFDKVCVFKEGVGEEQKQETSPEETAKKPLKVELDYSINQANTSLSKKSSKWKPFVIVLGVVVIILVVVIIQNSSSLKEEREQERAIKPDTKNNSFNETNPTEEKKLEPTPKLEEKHKEQDKQGKEAIKENPNTIYIIPKRDIWVEVIDLDEKKNSFQKVFKKSYPLEAKNHRLLLRFGHGHLILKNNHQEQDYNDSKTRRFLYEPNKGLTLINEAQYKALQQ |
3IVP Chain:A ((12-77)) | -------------------------------ALGLAIKEARKKQGLTREQVGAMIEIDPRYLTNIENKGQ-HP----SLQVLYDLVSLLNVSVDEFFLPASSQVKSTKRRQLENKIDNFTDADLVIMESVADGIVKSKEVGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IVP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22052 for 433 contacts (-50.9/contact) +
2D Compatibility (PS) -6846 + (NN) -2086 + (LL) 14612
1D Compatibility (HY) -1600 + (ID) 300
Total energy: -18272.0 ( -42.20 by residue)
QMean score : 0.357
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