Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNEVVVVAAKRSAVGSFLGSLKNVGARQMGVSVLKDALNASSLKPSDVDSVILGNVLGAGLGQNIARQIQLDAGIPNDRNAFSVNMVCGSSMKAIQLAHDSIVLGCDEVVVCGGVENMSAAPYLSFDMREGKRMGNANMIDSMIHDGLWDAFNDYHMGITADNVAQAYHISREDQDAFALQSQLKARAAINAGKFQEEITPIEIANKKGVV-VFKEDEYPR-DTTLESLAKLKPAFKKDGSVTAGNSSGINDGASIIILCSAKKAQKLGLKTMATIKGFGLGGCSPDIMGICPSIAIKNNLKNIKMNLNDINLFELNEAFAAQSIAVLKELELNPNIVNVNGGAIAIGHPIGASGARILVTLLHEMKRSGHGVGCASLCVGGGQGLSVVVEQK |
4E1L Chain:D ((4-395)) | MKDVVIVSAVRTPIGSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYI-----------------------------QYHMGITAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLGMTFEGLSKLKPAFKKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEVMGTGPIPATRKALKKAGLSINDIDLIEANEAFAAQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARILVTLIYEMQKRKVETGLATLCIGGGQGISMVVSR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4E1L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -217737 for 3524 contacts (-61.8/contact) +
2D Compatibility (PS) -39882 + (NN) -20485 + (LL) 1484
1D Compatibility (HY) -31600 + (ID) 9500
Total energy: -317720.0 ( -90.16 by residue)
QMean score : 0.466
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