Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRSWMKKKYFTLLLQSSVVLAVFIGCSSTRNHTFSALSNQENTDDKLPVVHSIKTINDVSSVGFEWSKVADTYDIDGFVLYRLKKD-SKLKRIATIKNPYATHYYDEGLETESSYTYQLATYKGDKISKLSEPILVKT---SFINPVESVFASLEYPKSVKVFWSPHPNP----SVSKYIIQRQN-KDGKFLNVGAVKNRLFVEFFDKDLEDGQKYRYQIIAENFM-GDKSRPSVIVEGKTK--DLPKEIANVRVSQNLTRQIELSWDKSPEEDVIAYRIYA----S----NNRNDKYKFI---AQTTNTSYVDK-IEKDNLTRYYKVVAVDKTHLEGALPKEPAMGETSDRPEAPIITKGTIQDSSALIQWENNPSPKIATYAVYRFEANSKTPLRFGNITQNQFVDKDMKVGVAYRYQVVSVDKDGLESHPSKEVRLFLER |
| 3S98 Chain:A ((17-293)) | -----------------------------------------------------------DNFILRWN--------VTFSFDYQKTGMDNWIKLSGCQNITSTKCNFSS-NVYEEIKLRIRAEKE-NTSSWYEVDSFTPFRKAQIGPP-EVHLEAE-DKAIVIHISPG---SVMW-SFTYSLVIWKNSSGVEERIE----NIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQ-NQNYVLKWDYTYA--NMTFQVQWLHAFLKRNP----YKWKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNN-TSFWSEEIKFDT----------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S98.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37313 for 1469 contacts (-25.4/contact) +
2D Compatibility (PS) -24517 + (NN) -683 + (LL) 10532
1D Compatibility (HY) -4800 + (ID) 1850
Total energy: -58631.0 ( -39.91 by residue)
QMean score : 0.387
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