Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPLTHLNEENQPKMVDIGDKETTERIALASGRISMNKEAYDAIINHGVKKGPVLQTAIIAGIMAAKKTSELIPMCHPIMLNGVDIDILEEKETCSFKLYARVKTQAKTGVEMEALMSVSIGLLTIYDMVKVIDKSMTISGVMLEHKSGGKSGDYNAKK
3JQM Chain:H ((10-154))
----------RPRMVDVTEKPETFRTATAEAFVELTEEALSALEKGGVGKGDPLVVAQLAGILAAKKTADLIPLCHPLPLTGVEVRVELLKAEKRVRIEATVKTKAETGVEMEAMTACAVAALTVYDMLKAASKGLVISQVRLLHKAGGKSGEWRR--
General information:
TITO was launched using:
RESULT:
Template:
3JQM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82050 for 1170 contacts (-70.1/contact) +
2D Compatibility (PS) -15293 + (NN) -4135 + (LL) 772
1D Compatibility (HY) -10000 + (ID) 3300
Total energy: -114006.0 ( -97.44 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_3JQM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JQM-query.scw
PDB file :
Tito_Scwrl_3JQM.pdb
: