Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYIDDGLENQTILITGGAGFVGSNLAFYFQENHPKAKVVVLDKFRSNTLSSNNRPSSLGHFKNLIGFKGEVIIADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYGNTKAPNIVGSNESPENVYGFSKLCMDEFVLSHSSDNV-VGLRYFNVYGSREFYKEKTASMVLQLALSAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQKSGVYNVGYSQARSYNEIVSILKEHLGDFKVSYIKNPYTFFQKHTQAHIEPTILDLDYTPLYDLESGIKDYLPHIHAIFKEQHA |
| 3SXP Chain:D ((1-324)) | MRYIDDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSN-------PSSLGHFKNLIGFKGEVIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYGNTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQKSGVYNVGYSQARSYNEIVSILKEHLGDFKVTYIKN---FFQKHTQAHIEPTILDLDYTPLYDLESGIKDYLPHIHAI------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3SXP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -178424 for 2754 contacts (-64.8/contact) +
2D Compatibility (PS) -33350 + (NN) -12311 + (LL) 724
1D Compatibility (HY) -46800 + (ID) 15200
Total energy: -285361.0 ( -103.62 by residue)
QMean score : 0.539
|
|
|