Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRHVIAFGLKIEILKKYKRTLQAHDDLRQLEPLGFENTQGSVYLKDQ
3BWV Chain:A ((3-16))
-TRQRIAIDMDEVLADTLGAVVKAVNERADLNIKMESLNGKKLGLVMD
General information:
TITO was launched using:
RESULT:
Template:
3BWV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2476 for 37 contacts (-66.9/contact) +
2D Compatibility (PS) -1351 + (NN) 1183 + (LL) 208
1D Compatibility (HY) -400 + (ID) 150
Total energy: -2986.0 ( -80.70 by residue)
QMean score : 0.027
(partial model without unconserved sides chains):
PDB file :
Tito_3BWV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BWV-query.scw
PDB file :
Tito_Scwrl_3BWV.pdb
: