Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTLGLSSLGGTLEFYDF----IIFVFFTSIIAKHFFPNTLSPIWSEINTYGIFAAGYLARPLG--GIVMAHFG--DKFGRKNMFMLSILLMVIPTFALALMPTFNDLVGFGVDSMGLTPKNAHYLGYIAPVFLVLVRICQGVAVGGELPGAWVFVHEHAPQGQKNTYIGFLTASVVSGILLGSLVYIGIYMVFDKPVVEDWAWRVAFGLGGIF---GIISVYLRRFLEETPVFQQMKQ----DDALVKF---PLKEVFKNSLFGISISMLITWVLTACILIFILFVPNFTLTHPNFHFTPFEKTYFQILGLVGIVSSIIFTGFLADKIKPHKVCMAFSAAFGFFGFLFFKEFYSNAP--SLVNTIILYFLA----CFCAGIMNFCPIFMSDVFSARIRFSGISFAYNIAYAITAGFTPQLSSWLNAKAIAVPESLQSYGLSFYILIVSLIAFITSLLMAPIYHKSNTQHEVSPTA |
4R2F Chain:A ((38-431)) | ----------GAIKFWDMPWATPAYNDAAKKIAEGF-SGANSKATYQIIQWNNFYQTFSSAIASKTGPAVSTGGGFQAFQFEEQGQIAYADKVIEKLKSN--GQFDDFLPGVVEPF-KTSKGYVAVPWQLDIRPLWYRKSLFEKAGVGVPTDWASLLEAGKKLKGVGAVGFATGSG-AGNNIGNHLMIMMMLNNG---------------GGVFTKDGELDVLNDRNVEAVEFLLELVSNGVIDPAAVSYTTDNLNAQWKDS--------------KAAYGMLTLGVPERVGDTS---------------GDIVVASPI--AGPHGDK--------------AALIFPNNIMMYTNTPSQEASEEFVVYYLGKLKELWQQKLMNALPVFKSITEMPEFTAD------PNNVKIVNEYVPIAKTFA-SQGTALSANLAALDGGQALNQFTQTVLTGKTDAKSALTAFDTGLKSVLKK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R2F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -419317 for 3192 contacts (-131.4/contact) +
2D Compatibility (PS) -38646 + (NN) -3688 + (LL) 7208
1D Compatibility (HY) -2000 + (ID) 3500
Total energy: -459943.0 ( -144.09 by residue)
QMean score : 0.133
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