Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKGSLAIVLGSLLASGTFYTALADGMPMKQQHNNMGESVELHFHYPIKGKQEPKNNHLVVLIDPKIEANKVIPENYQKEFEKSLFLQLSNFLERKGYSVSQFKDVSEIPQDIKEKALLVLRMDGNVAILEDIVEESDALSEEKVIDMSSGYLNLNFVEPKSEDIIHSFGIDVSKIKAVIERVELRRTNSGGFVPKTFVHRIKETDHDRAIKKIMNQAYHKVMAHITKELSKKHMERYEKVSSEMKKRK |
1OT0 Chain:A ((1-19)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKKVFKRLEKLFSKIQNWK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OT0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2110 for 67 contacts (31.5/contact) +
2D Compatibility (PS) -2091 + (NN) -648 + (LL) 16848
1D Compatibility (HY) -1600 + (ID) 350
Total energy: 14269.0 ( 212.97 by residue)
QMean score : 0.469
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