Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAISKEEVLEYIGSLSVLELSELVKMFEEKFGVSATPTVVAGAA----VA-----G---GAAAESEEKTEFNVILADSG-AEKIKVIKVVREI-TGLGLKEAKDATEKTPHVLKEGVNKEEAETIKKKLEEVGAKVEVK
2FTC Chain:E ((2-137))
---KIQQLVQDIASLTLLEISDLNELLKKTLKIQDVGLMPMGGMVPGAAPAPTAPEAAEEDVPKQKERTHFTVRLTEAKPVDKVKLIKEIKNYVQGINLVQAKKLVESLPQEIKANVAKAEAEKIKAALEAVGGTVVLE
General information:
TITO was launched using:
RESULT:
Template:
2FTC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1081401 for 6555 contacts (165.0/contact) +
2D Compatibility (PS) -11005 + (NN) 3510 + (LL) 556
1D Compatibility (HY) -1200 + (ID) 750
Total energy: 1072512.0 ( 163.62 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_2FTC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FTC-query.scw
PDB file :
Tito_Scwrl_2FTC.pdb
: