Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATKKTKKNKEKKQALENPLKGLYLSLRLKAFITDIFMIYTPMLYIMTYAILGSAKDFRENQSAIFLCLLFYALTHSFFIAFKSQSPGMRYA---RFKLVKNNGEKVDFFLAL------WRFVLWVLSMGLLVGF-VAPFIFKFFLHDKFSSTHIEIIKEEI
2Q7A Chain:A ((1-152))
-MDKGQIYGSIIQRNYRHPISGQIEDSGGEHSFDIGQGMVEGTVY--SDAMLEVSDA-GKIVLTFRMSLADYSGNYQFWIQPGGTGSFQAVDYNITQKGTDTNGTTLDIAISLPTVNSIIRGSMFVEPMGREVVFYLSASELIQKYSGNMLAQLVT------
General information:
TITO was launched using:
RESULT:
Template:
2Q7A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74075 for 997 contacts (-74.3/contact) +
2D Compatibility (PS) -14306 + (NN) 10552 + (LL) 1636
1D Compatibility (HY) -1600 + (ID) 1050
Total energy: -78843.0 ( -79.08 by residue)
QMean score : 0.086
(partial model without unconserved sides chains):
PDB file :
Tito_2Q7A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q7A-query.scw
PDB file :
Tito_Scwrl_2Q7A.pdb
: