Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MISLIEKAPYIPYPL-ALYEKLE-QRHTLLFESAEIESKAHTKSLLMAKACLKLVCNHNIVTITSLTPNGGAFLQTLSAFFKTPIQDNALTLTYTKDKKIQDEFLKLFEPSPFDALRGLFKSVK----TRPKHPFTLFSAGVFSFEMLNFFEDLPHLKANDNTANDFIFYVAQNLIIIDHKEKSAEILGACFDERFKTEIAKELQDLKELVKNIKSDFIPKKAKQSIEVSVSCDDSEFEKKVLFLQEEIKKGEIFQAVLSRSFYMEC-LEGLSAYYHLKLSNPSPYMFYIKDSDFILFGASPESALKYNALTNTAEIYPIAGTRLRGKDKQGNIDYDLDSKMEFDLQHDYKERAEHIMLVDLARNDMARVSK--KRYCDKLLKVDKYSNVMHLVSRVVGELKKGCDSLHAYRSFMNAGTLSGAPKISAIKLIYQLENQRRGSYGGSVGYLNSEGSMDSCITIRSCFVKNNRAVIQAGAGIVLDSVPQNEANETRAKVQALIDAIRKTIS |
| 1K0E Chain:A ((7-452)) | ---AVITLLWRQDAAEFYFSRLSHLPWAMLLHSGYADHPYSRFDIVVAEPICTLTTFGKETVVSESE--KR----------------------------------TTTTDDPLQVLQQVLDRADIRPTHNEDLPFQGGALGLFGYDLGRRFESLPEIAEQDIVLPDMAVGIYDWALIVDHQRHTVSLLSHNDVNA----RRAWLESQ---QFS-----PQEDFTLTSDWQSNMTREQYGEKFRQVQEYLHSGDCYQVNLAQRFHATYSGDEWQAFLQLNQANRAPFSAFLRLEQGAILSLSPERFILCDN--SEIQTRPIKGTLPR--------------------ANSAKDRAENLMIVDLMRNDIGRVAVAGSVKVPELFVVEPFPAVHHLVSTITAQLPEQLHASDLLRAAFPGGSITGAPKVRAMEIIDELEPQRRNAWCGSIGYLSFCGNMDTSITIRTLTAINGQIFCSAGGGIVADSQEEAEYQETFDKVNRILKQLEK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K0E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -209116 for 3843 contacts (-54.4/contact) +
2D Compatibility (PS) -45709 + (NN) -16847 + (LL) 5120
1D Compatibility (HY) -18800 + (ID) 5000
Total energy: -290352.0 ( -75.55 by residue)
QMean score : 0.396
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