Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFIDTHCHLDHKDYENDLDEVLKESLEKGVTQCVIPGADMKDLNRAVGISEKFEGVFFAIGAHPYDVESFDEGLFEKFVS-----HQKCVAIGECGLDYYRLPELSERENYKSKQKEIFTKQIEFSIQHNKPLIIHIREASFDSLNLLKSYPK-AFGVLHCFNAD-SMLLELSDR-FYYGIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIIHIETEELASLSTHNAQTLFNFP |
| 1ZZM Chain:A ((4-259)) | RFIDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIVPATEAENFARVLALAENYQPLYAALGLHPGMLEKHSDVSLEQLQQALERRPAKVVAVGEIGLDLFGDDP------QFERQQWLLDEQLKLAKRYDLPVILHSRRTHDKLAMHLKRHDLPRTGVVHGFSGSLQQAERFVQLGYKIGVGGTITYPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFAVLCELRREPADEIAQALLNNTYTLFNVP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZZM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152504 for 2179 contacts (-70.0/contact) +
2D Compatibility (PS) -26375 + (NN) -14031 + (LL) 376
1D Compatibility (HY) -9600 + (ID) 3400
Total energy: -205534.0 ( -94.32 by residue)
QMean score : 0.579
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