Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKFLSILSILVLALLVTACGSDSSDKKSAKKEEKMETVTYIADINGAKLEATFSHVGDNLRKVDQKMVYPLTALGLESGANLDDATKKQLEEQVASQYSAYKESKGASLETKFTDEALELTM-SVDLYKA-DKDSVASLLGGTTDPKNVSLKETVKQFEAQGFKKKES |
3QIJ Chain:B ((169-226)) | ----------------------------------------------------------------------------------------KELEEKVMELHKSYRSMTPAQADLEFLENAKKLSMYGVDLHKAKDLEGVDIILG--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QIJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1936 for 193 contacts (10.0/contact) +
2D Compatibility (PS) -5484 + (NN) -252 + (LL) 7672
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: 72.0 ( 0.37 by residue)
QMean score : 0.153
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