Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLTGIHHVSIFTANARANFDFYTKIMGLRLVKKSVNQDDPYTYHLYYGDEIGSPGTALTFFEVPNMAK--NHPSRNAISGLSLRVPSDEALHYWDKRLDEHRIFHSKPIDQFGRKIIRLKDTDGLPVNLISDETSTQVTEVTPWEDSLVPAEYAIRGLGPVRFSVFKKEKTDRLLTKILGFERIGAYEDDDKLVTVFKTGNVGLGGEVHVESRPDLEQGNLGAGGIHHVAFRVPTDGDLIGWTEMIQDLGYKNSGYVDRFYFHSLYFRESNGILIELATDEPGFQTDFTK-EHGTYVDLPPHLEERREDILAHLKPLDTDK |
| 3OAJ Chain:A ((4-309)) | KKTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGARQGVIGDGQVGVTSYVVPKGA---MAFWEKRLEKFNVPYTKI-ERFGEQYVEFDDPHGLHLEIVEREEGEA----NTWTFGEVTPDVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG----DFVRYRSAG-DIGNVIDLKLTPI-GRGQMGAGTVHHIAWRANDDEDQLDWQRYIASHGYGVTPVRDRNYFNAIYFREHGEILFEIATDPPGFAHDETQETMGEKLMLPVQYEPHRTQIEQGLLPFEV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102432 for 2592 contacts (-39.5/contact) +
2D Compatibility (PS) -32607 + (NN) -14293 + (LL) 1108
1D Compatibility (HY) -21600 + (ID) 5150
Total energy: -174974.0 ( -67.51 by residue)
QMean score : 0.580
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