Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEYQSQLARIQAKITTLKEKDVDLNLFGSESHAYKLNQPLSNQTIAAFENEHQIALPQGYRAFLEQIGDGGMGPYYGLETLVDGLCSSLDYKAEKYGVQTLSKPFPHTDDWNGPGYKEGMSDEAYDAWQELCFSDKEVFGLLRIANFGCGVSINLVVNGPSYGEIWVDDRNNDNGVYPDFYFGNEERLGFLEWYELWLDKSIEEFEKA |
| 2PAG Chain:A ((2-134)) | --------EEVIEQLREANEP-----------VP-VPLELPDEDQLVEIEEQLFINIPFVFKEFLLTVSDVVY-GSLEPVTVTDP-QSH----------TYLPE------------------------VCATAWDLGVPRELIPICQDG-EDYYCVEED----GTVLLWSA-----LVTEE-----SWESVWHWARDVWLE-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PAG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55064 for 983 contacts (-56.0/contact) +
2D Compatibility (PS) -13317 + (NN) 1529 + (LL) 2244
1D Compatibility (HY) -4800 + (ID) 800
Total energy: -70208.0 ( -71.42 by residue)
QMean score : 0.439
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