Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGSYGELIREIRLSKGLTQKEV-YTGIISRSYAIGFEKGKHEITLSLFEEILKRIMVPLDEFFFIYRDFSSTEDDSFWIDFVELSGKNDVVGMQALLDKITLERTEQSEVRKAILHTRIQTINHYLRTNVFDESNISDEYKKIIHDYLWKMQTWTLEEVRIFSNGISFFEEEVQIHFYQIMLKSYEKYRYYDRGRLLFCHLFANLTDELIIQNKINYANLVLEKLKEASETSGSFNSAFYRIVANYYQGAIWMKEGEVEKGYRQAKRAIQTWKELHYEAIADLYSVVLKQFLEKENIQVED |
4X4B Chain:D ((15-71)) | ------VIKKIRLEKGMTQEDLAYKSNLDRTYISGIERNSRNLTIKSLELIMKGLEVS-DVVFF--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4X4B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34342 for 355 contacts (-96.7/contact) +
2D Compatibility (PS) -5905 + (NN) -1472 + (LL) 20688
1D Compatibility (HY) -6400 + (ID) 1050
Total energy: -28481.0 ( -80.23 by residue)
QMean score : 0.558
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