Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKHNFTEDDFVYGESWGLVHR--GVLEDKEVERMKALRDKVVGKKGVAQTTLKPIGSVRIDGEVYEARLKTGYLEVGKPIIAVGIDFGYVLVNEDIQEGEK
4X01 Chain:A ((6-54))
------------SVHWSIVYRQLGNLLEQYEVEIARLKSQLVLEKKLRIQVEKEMESVKTK----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4X01.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9373 for 175 contacts (53.6/contact) +
2D Compatibility (PS) -4839 + (NN) -1873 + (LL) 3440
1D Compatibility (HY) -2800 + (ID) 550
Total energy: 2751.0 ( 15.72 by residue)
QMean score : 0.230
(partial model without unconserved sides chains):
PDB file :
Tito_4X01.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4X01-query.scw
PDB file :
Tito_Scwrl_4X01.pdb
: