Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKSSIYGLTWTNLTEWLEAHGQKKFRATQVWDWLYRKRVKTFEEMSNVPKETIELLTANFVMNTLEEQVVQESTDGTTKYLFKLSDGNLIETVMMKQEYGLSVCVTTQVGCNIGCTFCASGLLKK-----SRDLTAGEIVEQIMNVQHYLDGRNLEERVSHVVVMGI-GEPFDN-YDNVMDFLRVINHDKGLAIGARHITVSTSGLAP--RIIDFANEDFQVNLAISLHAPNNELRTSIMRINKTYSIEKLMEAIHYYVNKTNRRITFEYIMLKGVNDHKKEALELAALLGEHRH-LAYVNLIPYNPVDEH--IDYERSTKEDVLAFYDTLKKNGINCVIRREHGTDIDAACGQLRSKQIKRVGVRERMKQKQAAAEE |
| 1R30 Chain:A ((72-275)) | -----------------------------------------------------------------------------------------------------------KTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKA--------AGSTRFCMGAAWKNPHERDMPYLEQMVQGV-KAMGL-----EACM-TLGTLSESQAQRLANAG-LDYYNHNLDT-SPEFYGNIIT---TRTYQERLDTLEKVRD-AGIKVCS--GGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARI--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R30.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125819 for 1466 contacts (-85.8/contact) +
2D Compatibility (PS) -20953 + (NN) -11671 + (LL) 13472
1D Compatibility (HY) -1600 + (ID) 1250
Total energy: -147821.0 ( -100.83 by residue)
QMean score : 0.458
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