Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKQSADKRRIEK-NDKPFFYLADTVWSAFTNIDLTDWAYYLKVRK-EQGFNVLQINILPQWDRSVLKKIQEPFGINEGFFDLKAKNEAYFKHAEKMLEMAVNQGFTPALVLLWCNYIPETWGAKFGTSPLFRKEDIKPYTEMMLEHFEQF-EPIYIISGDTDFP---TETVTDYYLEALETVSKKAPHALKVLHICGRLKDIPENLQTHPALDLYFYQSGHNSEHQSM-AYTLAEHFSQLEPIKPVINSEPCYELMGYSRQKYGRFSREDVRKAAWQSVLSGAIAGISYGAHGIWSWHEEGSTFGSALGEGFVSPFNWRQALHFEGATDYAFLKSFILANDLTTLAPINLVLNQTPEIRAAETEKVVIIYVPSNVPIYLKGQFVSLDDYAIDLEQGKKVSLAKILHEEKTEIQMTPFLKDSLYVIHK |
| 3PZT Chain:A ((36-258)) | --QLSIKGTQLVNRDGKAVQLKGISSHGLQWYGE-YVNKDSLKWLRDDWGITVFRAAMYTAD---------G---------G-YIDNPSVKNKVKEAVEAAKELGIYVIIDWHILNDGN---------P-NQNKEKAKEFFKEMSSLYGNTPNVIYEIANEPNGDVNWKRDIKPYAEEVISVIRKNDPDNIIIVGTGTWSQDVN-DAADDQLKDANVMYALHFYAGTHGQFLRDKAN-YALSKGAPIFVTEWGTSDA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PZT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82035 for 1779 contacts (-46.1/contact) +
2D Compatibility (PS) -22591 + (NN) -5504 + (LL) 14272
1D Compatibility (HY) 2400 + (ID) 1400
Total energy: -94858.0 ( -53.32 by residue)
QMean score : 0.292
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