Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LEPLVSVIIPVYNVEKYVKRCLDSVLEQTYHNLEVIVVNDGATDNSAKVIKSISDN--RIRYFEKENGGQATARNFGLDVATGDYIVMVDSDDYISKNLVETCLDTVQKT-NADLVLFTSYNVNQEGKMQYIKRDKGIKVLDAGPTPWNKFYQADLWKGSRFPVGYWYEDLGIIPVVTLKAKNPVKIQDALYYYITDRADSQSNIQQVDHFLDVVIMLENVETELKKLGIYEESKDQLAYLYIEHLIYRLVLRKAIYITNKQERKKLIKKISTIIQEKFPNWGSYPYQAGGKLTATLKKKALWLYLHHLYLLGDLVWKYPFSIRSKQTGF |
| 2Z86 Chain:C ((375-501)) | --PLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFISQKNKGIGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z86.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101622 for 927 contacts (-109.6/contact) +
2D Compatibility (PS) -14138 + (NN) -8629 + (LL) 15812
1D Compatibility (HY) -12000 + (ID) 2400
Total energy: -122977.0 ( -132.66 by residue)
QMean score : 0.597
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