Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEWSEVEVHTTNEAVEPVANVLTEFGAAGVSIEDVADFLREREDKFGEIYALRREDYPEDGVIIKAYFLKTTEFVEQIPEIEQTLKNLSTFDIPLGKFQFVVNDVDDEEWATAWKKYYHPVQITDRITIVPSWESYTPSANEIIIELDPGMAFGTGTHPTTQLCIRALSNYLQPGDEVIDVGTGSGVLSIASAKLGAKSILATDLDEIATRAAEENITLNKTEHIITVKQNNLLQDINKTNVDIVVANILAEVILLFPEDVYKALKPGGVFIASGIIEDKAKVVEEALKNAGLIIEKMEQQGDWVAIISKRGVE |
| 3CJQ Chain:D ((41-254)) | ----------------------------------------------------------------------------------------APVDLP---YEGVWEEV--EDWLEAWRRDLKPALAPPFVVLAP-WHTW--EGAEIPLVIEPGMAFGTGHHETTRLALKALARHLRPGDKVLDLGTGSGVLAIAAEKLGGKA-LGVDIDPMVLPQAEANAKRNGVRPRFL--EGSLEAALPFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEEAAEGEWVLLAYGR--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CJQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97474 for 1765 contacts (-55.2/contact) +
2D Compatibility (PS) -23405 + (NN) -16153 + (LL) 7832
1D Compatibility (HY) -13200 + (ID) 3900
Total energy: -146300.0 ( -82.89 by residue)
QMean score : 0.554
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